Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 AC018665.1-201ENST00000622927 1362 ntBASIC11.92□□□□□ -0.5
CDC34P49427 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CDC34P49427 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 AL133267.1-201ENST00000398220 340 ntBASIC11.91□□□□□ -0.5
CDC34P49427 FO393414.2-201ENST00000405153 598 ntBASIC11.91□□□□□ -0.5
CDC34P49427 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 TMEM198B-204ENST00000484016 896 ntBASIC11.91□□□□□ -0.5
CDC34P49427 RNA5SP415-201ENST00000517246 115 ntBASIC11.91□□□□□ -0.5
CDC34P49427 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 AC025181.2-201ENST00000606994 802 ntBASIC11.91□□□□□ -0.5
CDC34P49427 MIR7706-201ENST00000613747 67 ntBASIC11.91□□□□□ -0.5
CDC34P49427 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CDC34P49427 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
CDC34P49427 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.91□□□□□ -0.5
CDC34P49427 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.91□□□□□ -0.5
CDC34P49427 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CDC34P49427 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
CDC34P49427 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms