Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 PPP1R2P4-201ENST00000424051 595 ntBASIC16.62■□□□□ 0.25
TM4SF4P48230 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.62■□□□□ 0.25
TM4SF4P48230 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.62■□□□□ 0.25
TM4SF4P48230 KRT8P2-201ENST00000556193 944 ntBASIC16.62■□□□□ 0.25
TM4SF4P48230 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.62■□□□□ 0.25
TM4SF4P48230 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.62■□□□□ 0.25
TM4SF4P48230 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.62■□□□□ 0.25
TM4SF4P48230 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM4SF4P48230 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.62■□□□□ 0.25
TM4SF4P48230 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AC090340.1-201ENST00000620778 4980 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AC079328.2-201ENST00000561241 3354 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 ASS1P2-201ENST00000439895 1223 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.61■□□□□ 0.25
TM4SF4P48230 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AC092612.1-201ENST00000514501 998 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 KNOP1P1-201ENST00000542108 989 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 AL590235.1-201ENST00000564650 861 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.61■□□□□ 0.25
TM4SF4P48230 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.61■□□□□ 0.25
TM4SF4P48230 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.61■□□□□ 0.25
TM4SF4P48230 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM4SF4P48230 PCDHA14-201ENST00000506751 2298 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 AD000864.1-201ENST00000624076 2295 ntBASIC16.61■□□□□ 0.25
TM4SF4P48230 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
TM4SF4P48230 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF4P48230 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.6■□□□□ 0.25
TM4SF4P48230 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM4SF4P48230 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms