Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GABRA4P48169 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.13□□□□□ -0.15
GABRA4P48169 NKAIN1P1-201ENST00000435754 582 ntBASIC14.13□□□□□ -0.15
GABRA4P48169 KLF2P1-201ENST00000447438 1042 ntBASIC14.13□□□□□ -0.15
GABRA4P48169 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.13□□□□□ -0.15
GABRA4P48169 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.13□□□□□ -0.15
GABRA4P48169 AC023824.1-201ENST00000562945 2975 ntBASIC14.13□□□□□ -0.15
GABRA4P48169 AC103810.3-201ENST00000583567 96 ntBASIC14.13□□□□□ -0.15
GABRA4P48169 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 AL023803.2-201ENST00000620080 638 ntBASIC14.13□□□□□ -0.15
GABRA4P48169 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.13□□□□□ -0.15
GABRA4P48169 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GABRA4P48169 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GABRA4P48169 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.13□□□□□ -0.15
GABRA4P48169 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GABRA4P48169 AC018442.1-201ENST00000421439 2061 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 AC244394.1-201ENST00000435000 1665 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 DPM3-202ENST00000368399 517 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GABRA4P48169 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 BX284668.4-201ENST00000453917 508 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 RNMTL1P1-201ENST00000454103 560 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 TUBB8P8-201ENST00000458717 1058 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.12□□□□□ -0.15
GABRA4P48169 AC044849.1-201ENST00000519737 1188 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GABRA4P48169 AC100827.2-201ENST00000563214 1194 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GABRA4P48169 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.12□□□□□ -0.15
GABRA4P48169 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.12□□□□□ -0.15
GABRA4P48169 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GABRA4P48169 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.12□□□□□ -0.15
GABRA4P48169 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GABRA4P48169 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms