Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FAU-201ENST00000279259 461 ntTSL 2 BASIC16.27■□□□□ 0.2
HTTP42858 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.27■□□□□ 0.2
HTTP42858 JPT2-203ENST00000382711 894 ntTSL 4 BASIC16.27■□□□□ 0.2
HTTP42858 SNORA57-201ENST00000383870 149 ntBASIC16.27■□□□□ 0.2
HTTP42858 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.27■□□□□ 0.2
HTTP42858 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.27■□□□□ 0.2
HTTP42858 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.27■□□□□ 0.2
HTTP42858 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.27■□□□□ 0.2
HTTP42858 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.27■□□□□ 0.2
HTTP42858 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HTTP42858 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
HTTP42858 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTTP42858 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.27■□□□□ 0.19
HTTP42858 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.27■□□□□ 0.19
HTTP42858 CDCA4P4-201ENST00000435216 680 ntBASIC16.27■□□□□ 0.19
HTTP42858 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.27■□□□□ 0.19
HTTP42858 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.27■□□□□ 0.19
HTTP42858 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HTTP42858 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HTTP42858 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HTTP42858 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTTP42858 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HTTP42858 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
HTTP42858 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
HTTP42858 SCARNA12-201ENST00000459155 270 ntBASIC16.26■□□□□ 0.19
HTTP42858 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.26■□□□□ 0.19
HTTP42858 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HTTP42858 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 AC027612.2-202ENST00000445955 1199 ntBASIC16.26■□□□□ 0.19
HTTP42858 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 ALG1L7P-201ENST00000502317 768 ntBASIC16.26■□□□□ 0.19
HTTP42858 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
HTTP42858 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HTTP42858 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HTTP42858 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HTTP42858 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.25■□□□□ 0.19
HTTP42858 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.25■□□□□ 0.19
HTTP42858 ANKRD26P1-203ENST00000569528 966 ntBASIC16.25■□□□□ 0.19
HTTP42858 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 AC098657.1-201ENST00000416270 1135 ntBASIC16.25■□□□□ 0.19
HTTP42858 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 KRT8P30-201ENST00000432100 650 ntBASIC16.25■□□□□ 0.19
HTTP42858 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.25■□□□□ 0.19
HTTP42858 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 AC091951.1-201ENST00000512854 2465 ntBASIC16.25■□□□□ 0.19
HTTP42858 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.25■□□□□ 0.19
HTTP42858 OR51A9P-201ENST00000422578 911 ntBASIC16.25■□□□□ 0.19
HTTP42858 ST13P19-201ENST00000442505 1124 ntBASIC16.25■□□□□ 0.19
HTTP42858 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HTTP42858 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.25■□□□□ 0.19
HTTP42858 AC090820.1-201ENST00000519722 591 ntBASIC16.25■□□□□ 0.19
HTTP42858 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.25■□□□□ 0.19
HTTP42858 AL132994.1-201ENST00000554098 400 ntBASIC16.25■□□□□ 0.19
HTTP42858 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.25■□□□□ 0.19
HTTP42858 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.25■□□□□ 0.19
HTTP42858 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HTTP42858 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms