Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.35
CD40P25942 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.9□□□□□ -0.35
CD40P25942 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.89□□□□□ -0.35
CD40P25942 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 SHC1P1-201ENST00000425230 1745 ntBASIC12.89□□□□□ -0.35
CD40P25942 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.89□□□□□ -0.35
CD40P25942 AC021723.1-201ENST00000486306 515 ntBASIC12.89□□□□□ -0.35
CD40P25942 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.89□□□□□ -0.35
CD40P25942 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CD40P25942 RN7SL371P-201ENST00000578099 267 ntBASIC12.89□□□□□ -0.35
CD40P25942 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 AC244452.3-201ENST00000636814 210 ntBASIC12.89□□□□□ -0.35
CD40P25942 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40P25942 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40P25942 ACE3P-201ENST00000423435 1973 ntBASIC12.89□□□□□ -0.35
CD40P25942 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40P25942 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD40P25942 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 AC013268.4-201ENST00000637413 2228 ntBASIC12.88□□□□□ -0.35
CD40P25942 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD40P25942 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.88□□□□□ -0.35
CD40P25942 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 AC091804.1-201ENST00000486888 567 ntBASIC12.88□□□□□ -0.35
CD40P25942 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.88□□□□□ -0.35
CD40P25942 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.88□□□□□ -0.35
CD40P25942 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD40P25942 AC005730.2-201ENST00000564549 1184 ntBASIC12.88□□□□□ -0.35
CD40P25942 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CD40P25942 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms