Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP8P22894 AC063926.3-201ENST00000624734 5658 ntBASIC15.71■□□□□ 0.1
MMP8P22894 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
MMP8P22894 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP8P22894 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 MYADML-201ENST00000474610 2147 ntBASIC15.7■□□□□ 0.1
MMP8P22894 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MMP8P22894 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AL035633.1-201ENST00000406139 838 ntBASIC15.7■□□□□ 0.1
MMP8P22894 RN7SKP175-201ENST00000408472 289 ntBASIC15.7■□□□□ 0.1
MMP8P22894 CD8B2-202ENST00000417670 633 ntBASIC15.7■□□□□ 0.1
MMP8P22894 AL590640.2-201ENST00000457038 527 ntBASIC15.7■□□□□ 0.1
MMP8P22894 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 FTH1P14-201ENST00000482930 551 ntBASIC15.7■□□□□ 0.1
MMP8P22894 ALG3P1-201ENST00000508806 1114 ntBASIC15.7■□□□□ 0.1
MMP8P22894 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP8P22894 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MMP8P22894 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP8P22894 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AC105233.6-201ENST00000642093 218 ntBASIC15.7■□□□□ 0.1
MMP8P22894 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AC009093.2-202ENST00000620513 2079 ntBASIC15.7■□□□□ 0.1
MMP8P22894 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP8P22894 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MMP8P22894 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 HSPA7-201ENST00000445535 1927 ntBASIC15.7■□□□□ 0.1
MMP8P22894 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
MMP8P22894 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
MMP8P22894 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP8P22894 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP8P22894 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
MMP8P22894 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MMP8P22894 AC027601.5-201ENST00000624065 2482 ntBASIC15.69■□□□□ 0.1
MMP8P22894 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MMP8P22894 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MMP8P22894 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MMP8P22894 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 CNN2P8-201ENST00000421872 913 ntBASIC15.69■□□□□ 0.1
MMP8P22894 FAM197Y7-201ENST00000432892 766 ntBASIC15.69■□□□□ 0.1
MMP8P22894 AC016694.1-201ENST00000434179 700 ntBASIC15.69■□□□□ 0.1
MMP8P22894 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 AP003171.2-201ENST00000528208 925 ntBASIC15.69■□□□□ 0.1
MMP8P22894 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP8P22894 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.69■□□□□ 0.1
MMP8P22894 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP8P22894 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP8P22894 AC244669.2-201ENST00000612320 853 ntBASIC15.69■□□□□ 0.1
MMP8P22894 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP8P22894 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP8P22894 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms