Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMPD1P17405 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 AP000356.3-201ENST00000382243 753 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 TSPY25P-201ENST00000429463 745 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.46■□□□□ 0.23
SMPD1P17405 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.46■□□□□ 0.23
SMPD1P17405 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.46■□□□□ 0.23
SMPD1P17405 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 AC003686.1-201ENST00000550956 1034 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 KRT8P28-201ENST00000433288 1390 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 AL136172.1-201ENST00000598590 1394 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMPD1P17405 AL590440.2-201ENST00000641973 1595 ntBASIC16.46■□□□□ 0.23
SMPD1P17405 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
SMPD1P17405 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SMPD1P17405 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMPD1P17405 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SMPD1P17405 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 RPS9P1-201ENST00000419943 583 ntBASIC16.45■□□□□ 0.22
SMPD1P17405 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SMPD1P17405 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 AC135983.4-201ENST00000564116 1262 ntBASIC16.45■□□□□ 0.22
SMPD1P17405 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.45■□□□□ 0.22
SMPD1P17405 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SMPD1P17405 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 AC007950.2-201ENST00000615045 2347 ntBASIC16.45■□□□□ 0.22
SMPD1P17405 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
SMPD1P17405 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMPD1P17405 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMPD1P17405 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.44■□□□□ 0.22
SMPD1P17405 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 ACE3P-201ENST00000423435 1973 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.44■□□□□ 0.22
SMPD1P17405 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMPD1P17405 RNA5SP359-201ENST00000364838 113 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.44■□□□□ 0.22
SMPD1P17405 AL583805.1-201ENST00000391389 531 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 AL512430.1-201ENST00000392575 860 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 BANF1P3-201ENST00000412556 261 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.44■□□□□ 0.22
SMPD1P17405 AL592076.1-201ENST00000424448 303 ntBASIC16.44■□□□□ 0.22
SMPD1P17405 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.44■□□□□ 0.22
SMPD1P17405 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms