Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.76■□□□□ 0.11
RARAP10276 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RARAP10276 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RARAP10276 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 KLF2P2-201ENST00000416807 1039 ntBASIC15.75■□□□□ 0.11
RARAP10276 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 AC140912.1-201ENST00000577171 1054 ntBASIC15.75■□□□□ 0.11
RARAP10276 CLUHP6-201ENST00000580789 941 ntBASIC15.75■□□□□ 0.11
RARAP10276 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.75■□□□□ 0.11
RARAP10276 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.75■□□□□ 0.11
RARAP10276 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.75■□□□□ 0.11
RARAP10276 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.75■□□□□ 0.11
RARAP10276 AC055811.4-201ENST00000624039 1754 ntBASIC15.75■□□□□ 0.11
RARAP10276 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RARAP10276 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RARAP10276 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.74■□□□□ 0.11
RARAP10276 ENPP7P5-201ENST00000541031 1031 ntBASIC15.74■□□□□ 0.11
RARAP10276 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RARAP10276 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RARAP10276 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RARAP10276 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RARAP10276 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RARAP10276 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
RARAP10276 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms