Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.46□□□□□ -0.57
TCRAP04437 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
TCRAP04437 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.46□□□□□ -0.58
TCRAP04437 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
TCRAP04437 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
TCRAP04437 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TCRAP04437 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
TCRAP04437 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TCRAP04437 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TCRAP04437 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.45□□□□□ -0.58
TCRAP04437 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TCRAP04437 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TCRAP04437 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TCRAP04437 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 FAM58DP-201ENST00000428076 619 ntBASIC11.45□□□□□ -0.58
TCRAP04437 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.45□□□□□ -0.58
TCRAP04437 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.45□□□□□ -0.58
TCRAP04437 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 TMEM198B-204ENST00000484016 896 ntBASIC11.45□□□□□ -0.58
TCRAP04437 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.45□□□□□ -0.58
TCRAP04437 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 SLC25A1P1-201ENST00000528351 927 ntBASIC11.45□□□□□ -0.58
TCRAP04437 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 AC026150.2-201ENST00000564693 1156 ntBASIC11.45□□□□□ -0.58
TCRAP04437 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.45□□□□□ -0.58
TCRAP04437 AC105339.1-204ENST00000636249 355 ntBASIC11.45□□□□□ -0.58
TCRAP04437 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 CETN4P-206ENST00000642099 2168 ntBASIC11.45□□□□□ -0.58
TCRAP04437 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.45□□□□□ -0.58
TCRAP04437 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TCRAP04437 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 TCAM1P-207ENST00000485295 1537 ntBASIC11.45□□□□□ -0.58
TCRAP04437 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TCRAP04437 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 AL137783.1-201ENST00000623494 1896 ntBASIC11.44□□□□□ -0.58
TCRAP04437 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.44□□□□□ -0.58
TCRAP04437 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 CICP8-201ENST00000455800 2813 ntBASIC11.44□□□□□ -0.58
TCRAP04437 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TCRAP04437 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
TCRAP04437 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
TCRAP04437 AL080243.2-201ENST00000418783 582 ntBASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms