Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TRBV12-3P01733 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
TRBV12-3P01733 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC020910.5-201ENST00000623668 1865 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 INE2-201ENST00000630399 1874 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 RNA5SP486-201ENST00000515961 83 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MIR6775-201ENST00000617557 69 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 AC132938.4-201ENST00000623835 848 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 AL603764.1-201ENST00000636452 321 ntBASIC11.6□□□□□ -0.55
TRBV12-3P01733 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
TRBV12-3P01733 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TRBV12-3P01733 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 LINC01101-201ENST00000622953 1884 ntBASIC11.59□□□□□ -0.55
TRBV12-3P01733 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 CNN2P8-201ENST00000421872 913 ntBASIC11.59□□□□□ -0.55
TRBV12-3P01733 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 RPL7P3-201ENST00000441388 714 ntBASIC11.59□□□□□ -0.55
TRBV12-3P01733 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 KLF2P4-201ENST00000451959 1225 ntBASIC11.59□□□□□ -0.55
TRBV12-3P01733 AL391280.1-201ENST00000506969 1062 ntBASIC11.59□□□□□ -0.55
TRBV12-3P01733 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TRBV12-3P01733 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.59□□□□□ -0.55
TRBV12-3P01733 IGHV3-71-201ENST00000523324 359 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms