Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFP01375 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TNFP01375 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 ZBED1P1-201ENST00000502364 1930 ntBASIC14.56□□□□□ -0.08
TNFP01375 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TNFP01375 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 AC022532.1-201ENST00000624563 1728 ntBASIC14.56□□□□□ -0.08
TNFP01375 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFP01375 AC132872.4-202ENST00000622924 2756 ntBASIC14.56□□□□□ -0.08
TNFP01375 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TNFP01375 AL662890.1-201ENST00000396818 632 ntBASIC14.56□□□□□ -0.08
TNFP01375 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFP01375 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.56□□□□□ -0.08
TNFP01375 AL035414.1-201ENST00000451327 857 ntBASIC14.56□□□□□ -0.08
TNFP01375 GCOM2-201ENST00000509133 1104 ntBASIC14.56□□□□□ -0.08
TNFP01375 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFP01375 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 AC131206.1-201ENST00000538078 1211 ntBASIC14.56□□□□□ -0.08
TNFP01375 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 AC009884.2-201ENST00000603110 324 ntBASIC14.56□□□□□ -0.08
TNFP01375 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 AC091544.8-201ENST00000619490 361 ntBASIC14.56□□□□□ -0.08
TNFP01375 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.56□□□□□ -0.08
TNFP01375 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.56□□□□□ -0.08
TNFP01375 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 TUBBP5-203ENST00000508529 1334 ntBASIC14.56□□□□□ -0.08
TNFP01375 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFP01375 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFP01375 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFP01375 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFP01375 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 CYP46A4P-201ENST00000414953 267 ntBASIC14.55□□□□□ -0.08
TNFP01375 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFP01375 PUDPP3-201ENST00000445368 636 ntBASIC14.55□□□□□ -0.08
TNFP01375 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFP01375 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TNFP01375 RPL18P13-201ENST00000478088 569 ntBASIC14.55□□□□□ -0.08
TNFP01375 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFP01375 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFP01375 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFP01375 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms