Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MT-CO1P00395 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-CO1P00395 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MT-CO1P00395 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.41■□□□□ 0.06
MT-CO1P00395 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-CO1P00395 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
MT-CO1P00395 AC097376.2-205ENST00000610159 5334 ntBASIC15.41■□□□□ 0.06
MT-CO1P00395 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-CO1P00395 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 AC099063.4-201ENST00000641099 1602 ntBASIC15.4■□□□□ 0.06
MT-CO1P00395 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 REXO1L6P-201ENST00000603433 1515 ntBASIC15.4■□□□□ 0.06
MT-CO1P00395 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.4■□□□□ 0.06
MT-CO1P00395 AC245100.3-201ENST00000441281 285 ntBASIC15.4■□□□□ 0.06
MT-CO1P00395 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.4■□□□□ 0.06
MT-CO1P00395 AC079316.1-201ENST00000548397 411 ntBASIC15.4■□□□□ 0.06
MT-CO1P00395 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-CO1P00395 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.4■□□□□ 0.06
MT-CO1P00395 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 AHCYP2-201ENST00000430630 1300 ntBASIC15.4■□□□□ 0.06
MT-CO1P00395 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-CO1P00395 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
MT-CO1P00395 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-CO1P00395 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
MT-CO1P00395 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 LILRP1-201ENST00000444199 1370 ntBASIC15.39■□□□□ 0.05
MT-CO1P00395 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
MT-CO1P00395 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
MT-CO1P00395 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
MT-CO1P00395 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
MT-CO1P00395 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MT-CO1P00395 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 CD8B2-202ENST00000417670 633 ntBASIC15.39■□□□□ 0.05
MT-CO1P00395 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.39■□□□□ 0.05
MT-CO1P00395 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.39■□□□□ 0.05
MT-CO1P00395 RNA5SP412-201ENST00000516234 123 ntBASIC15.39■□□□□ 0.05
MT-CO1P00395 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
MT-CO1P00395 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-CO1P00395 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms