Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC004923.1-202ENST00000642106 209 ntBASIC16.12■□□□□ 0.17
CSPG5O95196 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
CSPG5O95196 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.12■□□□□ 0.17
CSPG5O95196 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.12■□□□□ 0.17
CSPG5O95196 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG5O95196 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG5O95196 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSPG5O95196 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.11■□□□□ 0.17
CSPG5O95196 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG5O95196 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSPG5O95196 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 MAGEA5-201ENST00000446757 942 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 AC116345.2-201ENST00000512837 523 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 RTN3P1-201ENST00000536295 711 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.11■□□□□ 0.17
CSPG5O95196 AC100827.2-201ENST00000563214 1194 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.11■□□□□ 0.17
CSPG5O95196 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.11■□□□□ 0.17
CSPG5O95196 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.11■□□□□ 0.17
CSPG5O95196 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CSPG5O95196 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSPG5O95196 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 E2F3P2-201ENST00000447755 1422 ntBASIC16.11■□□□□ 0.17
CSPG5O95196 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG5O95196 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CSPG5O95196 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 AC009093.2-202ENST00000620513 2079 ntBASIC16.1■□□□□ 0.17
CSPG5O95196 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 INE2-201ENST00000630399 1874 ntBASIC16.1■□□□□ 0.17
CSPG5O95196 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG5O95196 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG5O95196 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG5O95196 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.1■□□□□ 0.17
CSPG5O95196 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CSPG5O95196 AC234782.1-201ENST00000451950 919 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms