Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.43■□□□□ 0.38
CDKL5O76039 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.43■□□□□ 0.38
CDKL5O76039 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.43■□□□□ 0.38
CDKL5O76039 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 AC007191.1-201ENST00000623179 2995 ntBASIC17.43■□□□□ 0.38
CDKL5O76039 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.43■□□□□ 0.38
CDKL5O76039 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.43■□□□□ 0.38
CDKL5O76039 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 AL138725.1-201ENST00000407347 1314 ntBASIC17.43■□□□□ 0.38
CDKL5O76039 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CDKL5O76039 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDKL5O76039 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.43■□□□□ 0.38
CDKL5O76039 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.43■□□□□ 0.38
CDKL5O76039 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 AL354702.1-201ENST00000442006 1960 ntBASIC17.42■□□□□ 0.38
CDKL5O76039 AL138709.1-201ENST00000614840 1693 ntBASIC17.42■□□□□ 0.38
CDKL5O76039 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL5O76039 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.42■□□□□ 0.38
CDKL5O76039 AP001889.1-201ENST00000525414 633 ntBASIC17.42■□□□□ 0.38
CDKL5O76039 AL596325.1-201ENST00000563991 1082 ntBASIC17.42■□□□□ 0.38
CDKL5O76039 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 AC004466.1-201ENST00000599515 1080 ntBASIC17.42■□□□□ 0.38
CDKL5O76039 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CDKL5O76039 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDKL5O76039 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.42■□□□□ 0.38
CDKL5O76039 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 CU639417.3-201ENST00000624240 1404 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CDKL5O76039 AL512384.1-201ENST00000406683 331 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.41■□□□□ 0.38
CDKL5O76039 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.41■□□□□ 0.38
CDKL5O76039 MESTP3-201ENST00000503460 968 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 AC106760.1-201ENST00000508690 800 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 AC022447.6-201ENST00000515522 438 ntBASIC17.41■□□□□ 0.38
CDKL5O76039 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.41■□□□□ 0.38
CDKL5O76039 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDKL5O76039 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDKL5O76039 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDKL5O76039 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms