Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SNAI2O43623 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AC018442.1-201ENST00000421439 2061 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AC105206.1-202ENST00000314927 2368 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 CICP16-201ENST00000502609 2813 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 AC104457.1-201ENST00000401024 814 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 AC007967.2-201ENST00000432613 625 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 ADH5P3-201ENST00000433842 1137 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 SPCS2P4-201ENST00000436160 681 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.31□□□□□ -0.6
SNAI2O43623 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.31□□□□□ -0.6
SNAI2O43623 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.31□□□□□ -0.6
SNAI2O43623 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.31□□□□□ -0.6
SNAI2O43623 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AC091812.2-201ENST00000619081 385 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.31□□□□□ -0.6
SNAI2O43623 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SNAI2O43623 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.31□□□□□ -0.6
SNAI2O43623 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SNAI2O43623 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SNAI2O43623 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 MEX3B-202ENST00000558133 4333 ntBASIC11.3□□□□□ -0.6
SNAI2O43623 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
SNAI2O43623 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SNAI2O43623 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.3□□□□□ -0.6
SNAI2O43623 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SNAI2O43623 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
SNAI2O43623 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.3□□□□□ -0.6
SNAI2O43623 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.3□□□□□ -0.6
SNAI2O43623 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.3□□□□□ -0.6
SNAI2O43623 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SNAI2O43623 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms