Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RIPK2O43353 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RIPK2O43353 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RIPK2O43353 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.25■□□□□ 0.03
RIPK2O43353 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 FAM90A12P-201ENST00000519497 2375 ntBASIC15.24■□□□□ 0.03
RIPK2O43353 FAM90A24P-201ENST00000520792 2369 ntBASIC15.24■□□□□ 0.03
RIPK2O43353 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RIPK2O43353 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RIPK2O43353 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.24■□□□□ 0.03
RIPK2O43353 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 AL353779.1-201ENST00000434793 351 ntBASIC15.24■□□□□ 0.03
RIPK2O43353 HLA-V-204ENST00000476601 1289 ntBASIC15.24■□□□□ 0.03
RIPK2O43353 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.24■□□□□ 0.03
RIPK2O43353 AP000344.2-201ENST00000512987 629 ntBASIC15.24■□□□□ 0.03
RIPK2O43353 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RIPK2O43353 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.24■□□□□ 0.03
RIPK2O43353 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RIPK2O43353 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.24■□□□□ 0.03
RIPK2O43353 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.24■□□□□ 0.03
RIPK2O43353 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RIPK2O43353 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RIPK2O43353 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 AL645937.2-201ENST00000396808 931 ntBASIC15.23■□□□□ 0.03
RIPK2O43353 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.23■□□□□ 0.03
RIPK2O43353 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.23■□□□□ 0.03
RIPK2O43353 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.23■□□□□ 0.03
RIPK2O43353 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.23■□□□□ 0.03
RIPK2O43353 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 YBX1P5-201ENST00000509441 847 ntBASIC15.23■□□□□ 0.03
RIPK2O43353 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RIPK2O43353 MIR4469-201ENST00000583919 79 ntBASIC15.23■□□□□ 0.03
RIPK2O43353 AC004835.2-201ENST00000603762 682 ntBASIC15.23■□□□□ 0.03
RIPK2O43353 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.23■□□□□ 0.03
RIPK2O43353 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.23■□□□□ 0.03
RIPK2O43353 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RIPK2O43353 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RIPK2O43353 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms