Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.47□□□□□ -0.09
SLC28A1O00337 AC093004.1-201ENST00000508850 424 ntBASIC14.47□□□□□ -0.09
SLC28A1O00337 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC28A1O00337 AP001582.1-201ENST00000525856 295 ntBASIC14.47□□□□□ -0.09
SLC28A1O00337 AC055876.2-201ENST00000531834 546 ntBASIC14.47□□□□□ -0.09
SLC28A1O00337 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC28A1O00337 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.47□□□□□ -0.09
SLC28A1O00337 AC099568.2-201ENST00000609194 695 ntBASIC14.47□□□□□ -0.09
SLC28A1O00337 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 AC139530.3-201ENST00000620344 690 ntBASIC14.47□□□□□ -0.09
SLC28A1O00337 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC28A1O00337 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SLC28A1O00337 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SLC28A1O00337 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SLC28A1O00337 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC28A1O00337 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC28A1O00337 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A1O00337 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 AC006504.5-208ENST00000588784 2401 ntBASIC14.46□□□□□ -0.09
SLC28A1O00337 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
SLC28A1O00337 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A1O00337 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SLC28A1O00337 AL442647.2-201ENST00000429864 857 ntBASIC14.46□□□□□ -0.09
SLC28A1O00337 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A1O00337 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.46□□□□□ -0.09
SLC28A1O00337 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC28A1O00337 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC28A1O00337 KRT8P22-201ENST00000562317 1415 ntBASIC14.46□□□□□ -0.09
SLC28A1O00337 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC28A1O00337 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC28A1O00337 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
SLC28A1O00337 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SLC28A1O00337 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SLC28A1O00337 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC28A1O00337 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 AC092135.3-201ENST00000624151 1846 ntBASIC14.45□□□□□ -0.1
SLC28A1O00337 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC28A1O00337 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC28A1O00337 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC28A1O00337 GNAQP1-201ENST00000444815 1067 ntBASIC14.45□□□□□ -0.1
SLC28A1O00337 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
SLC28A1O00337 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms