Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC091951.1-201ENST00000512854 2465 ntBASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA3F8WFD2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 REXO1L4P-201ENST00000605109 1937 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AC104457.1-201ENST00000401024 814 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 BCYRN1-201ENST00000418539 200 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AC007969.1-201ENST00000433675 447 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FAM8A4P-201ENST00000435433 1213 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AP006547.1-201ENST00000563435 692 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 MIR3615-201ENST00000581999 87 ntBASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA3F8WFD2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NPIPA3F8WFD2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms