Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 AC012569.1-201ENST00000591191 1524 ntBASIC11.44□□□□□ -0.58
COLCA2A8K830 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
COLCA2A8K830 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
COLCA2A8K830 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
COLCA2A8K830 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.44□□□□□ -0.58
COLCA2A8K830 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
COLCA2A8K830 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
COLCA2A8K830 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
COLCA2A8K830 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
COLCA2A8K830 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.43□□□□□ -0.58
COLCA2A8K830 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
COLCA2A8K830 AC104457.1-201ENST00000401024 814 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 AC005014.1-201ENST00000432006 2976 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 KRT16P4-201ENST00000453883 522 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 AC128688.1-201ENST00000487626 519 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 C1QBPP2-201ENST00000528754 825 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 HNRNPUP1-201ENST00000554987 333 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.43□□□□□ -0.58
COLCA2A8K830 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.43□□□□□ -0.58
COLCA2A8K830 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.43□□□□□ -0.58
COLCA2A8K830 AC009955.4-201ENST00000597192 544 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.43□□□□□ -0.58
COLCA2A8K830 AL592071.1-201ENST00000611956 408 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
COLCA2A8K830 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
COLCA2A8K830 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
COLCA2A8K830 INTS4P1-201ENST00000438455 1935 ntBASIC11.43□□□□□ -0.58
COLCA2A8K830 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
COLCA2A8K830 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COLCA2A8K830 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
COLCA2A8K830 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
COLCA2A8K830 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.42□□□□□ -0.58
COLCA2A8K830 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
COLCA2A8K830 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
COLCA2A8K830 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COLCA2A8K830 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
COLCA2A8K830 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
COLCA2A8K830 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.42□□□□□ -0.58
COLCA2A8K830 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.42□□□□□ -0.58
COLCA2A8K830 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.42□□□□□ -0.58
COLCA2A8K830 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
COLCA2A8K830 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
COLCA2A8K830 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms