Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 GIMAP3P-201ENST00000495150 836 ntBASIC12.09□□□□□ -0.47
SRRM4A7MD48 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 CLUHP6-201ENST00000580789 941 ntBASIC12.09□□□□□ -0.47
SRRM4A7MD48 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 AL096865.1-201ENST00000606796 927 ntBASIC12.09□□□□□ -0.47
SRRM4A7MD48 AP005019.2-201ENST00000615104 511 ntBASIC12.09□□□□□ -0.47
SRRM4A7MD48 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SRRM4A7MD48 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SRRM4A7MD48 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.08□□□□□ -0.47
SRRM4A7MD48 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.08□□□□□ -0.47
SRRM4A7MD48 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SRRM4A7MD48 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 HSPA7-201ENST00000445535 1927 ntBASIC12.08□□□□□ -0.48
SRRM4A7MD48 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SRRM4A7MD48 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.08□□□□□ -0.48
SRRM4A7MD48 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms