Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC015818.8-201ENST00000587907 1519 ntBASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YJEFN3A6XGL0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC103702.1-201ENST00000548801 2630 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 MIR326-201ENST00000362220 95 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 RPSAP36-202ENST00000494591 1261 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 ALG3P1-201ENST00000508806 1114 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AL136301.1-201ENST00000615830 422 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 AC007686.3-201ENST00000619017 3487 ntBASIC15.56■□□□□ 0.08
YJEFN3A6XGL0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AL136172.1-201ENST00000598590 1394 ntBASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC079178.1-201ENST00000420915 656 ntBASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC244157.2-201ENST00000616239 1006 ntBASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 AC023824.1-201ENST00000562945 2975 ntBASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
YJEFN3A6XGL0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms