Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 FLJ16779-201ENST00000612722 7638 ntBASIC10.55□□□□□ -0.72
LINC01546A6NGU7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC01546A6NGU7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AGAP12P-201ENST00000585227 2359 ntBASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 TLE1P1-201ENST00000422965 589 ntBASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AL133215.2-201ENST00000609242 977 ntBASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AC148477.8-201ENST00000624298 468 ntBASIC10.54□□□□□ -0.72
LINC01546A6NGU7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC01546A6NGU7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PTENP1-202ENST00000532280 3996 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms