Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
DUXBA0A1W2PPF3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RN7SL832P-201ENST00000607781 1756 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AL137783.1-201ENST00000623494 1896 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 HLA-K-203ENST00000430151 1046 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC040169.1-201ENST00000565382 521 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 IL9RP2-201ENST00000423948 1312 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 KRT8P35-201ENST00000483942 1338 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AC093525.8-201ENST00000624099 1342 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.26□□□□□ -0.45
DUXBA0A1W2PPF3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
DUXBA0A1W2PPF3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
DUXBA0A1W2PPF3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
DUXBA0A1W2PPF3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
DUXBA0A1W2PPF3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
DUXBA0A1W2PPF3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms