Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 RN7SL769P-201ENST00000469386 295 ntBASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 AC105129.2-201ENST00000559536 390 ntBASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 AC105250.1-201ENST00000509378 2057 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC005089.1-201ENST00000619486 2241 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC007787.1-201ENST00000588095 1583 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 SERPINA13P-202ENST00000478994 924 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 RN7SL713P-201ENST00000582127 302 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AC016629.1-201ENST00000596579 586 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AL451050.2-201ENST00000606967 682 ntBASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDHGA9Q9Y5G4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 MIR769-201ENST00000390225 118 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 EIF4HP1-201ENST00000453115 687 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms