Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 REXO1L4P-201ENST00000605109 1937 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RPH3AQ9Y2J0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC005229.1-201ENST00000392885 409 ntBASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC114812.1-204ENST00000449669 728 ntBASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AC133552.6-201ENST00000613406 534 ntBASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TNRC18P2-201ENST00000417666 2714 ntBASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.85□□□□□ -0.19
RPH3AQ9Y2J0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 SNX18-202ENST00000343017 3140 ntBASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.84□□□□□ -0.19
RPH3AQ9Y2J0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms