Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 KRT17P5-201ENST00000332088 839 ntBASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 PPP1R2P4-201ENST00000424051 595 ntBASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 AL592076.1-201ENST00000424448 303 ntBASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 NUDT4P2-201ENST00000578341 546 ntBASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 BRD7P5-201ENST00000299197 1822 ntBASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 GUSBP10-201ENST00000417412 665 ntBASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AC079112.1-201ENST00000454972 939 ntBASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AP003392.6-201ENST00000607709 325 ntBASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 AP001184.1-201ENST00000637936 376 ntBASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.68■■□□□ 1.06
SHANK2Q9UPX8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 MT3-203ENST00000565838 421 ntTSL 3 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 MIR2392-201ENST00000584881 84 ntBASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC087392.5-201ENST00000612517 489 ntBASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 AC023157.3-201ENST00000619086 2088 ntBASIC21.67■■□□□ 1.06
SHANK2Q9UPX8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC21.66■■□□□ 1.06
SHANK2Q9UPX8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms