Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
STAG3Q9UJ98 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.32■■□□□ 1
STAG3Q9UJ98 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.32■■□□□ 1
STAG3Q9UJ98 ZBED1P1-201ENST00000502364 1930 ntBASIC21.32■■□□□ 1
STAG3Q9UJ98 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC21.32■■□□□ 1
STAG3Q9UJ98 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.32■■□□□ 1
STAG3Q9UJ98 TSPY25P-201ENST00000429463 745 ntBASIC21.32■■□□□ 1
STAG3Q9UJ98 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.32■■□□□ 1
STAG3Q9UJ98 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 AC141586.1-203ENST00000567242 366 ntBASIC21.32■■□□□ 1
STAG3Q9UJ98 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
STAG3Q9UJ98 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC21.32■■□□□ 1
STAG3Q9UJ98 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 AC018629.1-201ENST00000623381 1736 ntBASIC21.32■■□□□ 1
STAG3Q9UJ98 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
STAG3Q9UJ98 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.32■■□□□ 1
STAG3Q9UJ98 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.31■■□□□ 1
STAG3Q9UJ98 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.31■■□□□ 1
STAG3Q9UJ98 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC21.31■■□□□ 1
STAG3Q9UJ98 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.31■■□□□ 1
STAG3Q9UJ98 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.31■■□□□ 1
STAG3Q9UJ98 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC21.31■■□□□ 1
STAG3Q9UJ98 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.31■■□□□ 1
STAG3Q9UJ98 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
STAG3Q9UJ98 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
STAG3Q9UJ98 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC21.31■■□□□ 1
STAG3Q9UJ98 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.31■■□□□ 1
STAG3Q9UJ98 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC21.3■■□□□ 1
STAG3Q9UJ98 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
STAG3Q9UJ98 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 XBP1P1-201ENST00000436573 652 ntBASIC21.3■■□□□ 1
STAG3Q9UJ98 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.3■■□□□ 1
STAG3Q9UJ98 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.3■■□□□ 1
STAG3Q9UJ98 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.3■■□□□ 1
STAG3Q9UJ98 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.3■■□□□ 1
STAG3Q9UJ98 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
STAG3Q9UJ98 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
STAG3Q9UJ98 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
STAG3Q9UJ98 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms