Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 AL023775.1-201ENST00000454907 1746 ntBASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM248Q9NWD8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 RPS2P32-201ENST00000439199 892 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 PUDPP3-201ENST00000445368 636 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AL583810.1-201ENST00000553344 1045 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 EEF1DP1-201ENST00000585891 896 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AC008825.2-201ENST00000603374 718 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AP001002.3-201ENST00000623482 206 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 AL354702.1-201ENST00000442006 1960 ntBASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM248Q9NWD8 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC010141.1-201ENST00000411585 623 ntBASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC079178.1-201ENST00000420915 656 ntBASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MIR4741-201ENST00000579822 90 ntBASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MIR6752-201ENST00000618442 71 ntBASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC009542.2-202ENST00000619004 1067 ntBASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM248Q9NWD8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms