Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC025048.6-201ENST00000634326 1161 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 KRT8P22-201ENST00000562317 1415 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AL354702.1-201ENST00000442006 1960 ntBASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF3BQ9BZI7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC104596.2-201ENST00000512793 793 ntBASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC092552.1-201ENST00000547243 906 ntBASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC009118.2-201ENST00000613275 655 ntBASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF3BQ9BZI7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 PIN1P1-201ENST00000412108 996 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 KRT17P7-201ENST00000451704 1104 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 AC026434.2-201ENST00000506094 1078 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 AL596325.1-201ENST00000563991 1082 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 MIR600HG-201ENST00000449175 5984 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 AC007541.1-201ENST00000570282 1469 ntBASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF3BQ9BZI7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF3BQ9BZI7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms