Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 BNIP3P1-202ENST00000550043 1585 ntBASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.29□□□□□ -0.12
CNTNAP3Q9BZ76 AC092850.2-201ENST00000623821 2697 ntBASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AC012497.1-201ENST00000429392 575 ntBASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 AC011462.4-201ENST00000616866 449 ntBASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 MIR6769A-201ENST00000617340 73 ntBASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNTNAP3Q9BZ76 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 AC007326.2-201ENST00000624224 7579 ntBASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNTNAP3Q9BZ76 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC083801.1-201ENST00000491689 358 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC106820.3-201ENST00000561653 397 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC132872.1-201ENST00000566986 1195 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 NAV1-210ENST00000593583 726 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AC084781.1-201ENST00000613737 656 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AL450487.2-201ENST00000615934 407 ntBASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNTNAP3Q9BZ76 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms