Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP47Q96K76 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.79■□□□□ 0.92
USP47Q96K76 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 AL645933.1-201ENST00000440087 609 ntBASIC20.79■□□□□ 0.92
USP47Q96K76 KLF2P1-201ENST00000447438 1042 ntBASIC20.79■□□□□ 0.92
USP47Q96K76 AC099548.2-209ENST00000480264 625 ntBASIC20.79■□□□□ 0.92
USP47Q96K76 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 DUX4L46-201ENST00000566845 751 ntBASIC20.79■□□□□ 0.92
USP47Q96K76 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.79■□□□□ 0.92
USP47Q96K76 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 AC244394.1-201ENST00000435000 1665 ntBASIC20.79■□□□□ 0.92
USP47Q96K76 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP47Q96K76 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.79■□□□□ 0.92
USP47Q96K76 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP47Q96K76 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.78■□□□□ 0.92
USP47Q96K76 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.78■□□□□ 0.92
USP47Q96K76 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.78■□□□□ 0.92
USP47Q96K76 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.78■□□□□ 0.92
USP47Q96K76 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.78■□□□□ 0.92
USP47Q96K76 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.78■□□□□ 0.92
USP47Q96K76 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.78■□□□□ 0.92
USP47Q96K76 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.78■□□□□ 0.92
USP47Q96K76 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP47Q96K76 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP47Q96K76 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
USP47Q96K76 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
USP47Q96K76 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.77■□□□□ 0.92
USP47Q96K76 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.77■□□□□ 0.92
USP47Q96K76 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.77■□□□□ 0.92
USP47Q96K76 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.77■□□□□ 0.92
USP47Q96K76 Z98259.2-201ENST00000641583 609 ntBASIC20.77■□□□□ 0.92
USP47Q96K76 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC20.77■□□□□ 0.92
USP47Q96K76 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP47Q96K76 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
USP47Q96K76 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.77■□□□□ 0.92
USP47Q96K76 AGGF1P1-201ENST00000509500 2073 ntBASIC20.77■□□□□ 0.92
USP47Q96K76 AC232323.1-201ENST00000540724 2099 ntBASIC20.77■□□□□ 0.92
USP47Q96K76 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP47Q96K76 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.77■□□□□ 0.92
USP47Q96K76 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP47Q96K76 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP47Q96K76 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP47Q96K76 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
USP47Q96K76 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
USP47Q96K76 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.77■□□□□ 0.91
USP47Q96K76 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
USP47Q96K76 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
USP47Q96K76 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.76■□□□□ 0.91
USP47Q96K76 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP47Q96K76 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.76■□□□□ 0.91
USP47Q96K76 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.76■□□□□ 0.91
USP47Q96K76 TPT1P11-201ENST00000458482 498 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms