Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 AP001002.3-201ENST00000623482 206 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 AC016397.2-201ENST00000624848 1985 ntBASIC15.25■□□□□ 0.03
RTP4Q96DX8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTP4Q96DX8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 LINC01230-201ENST00000625222 3017 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 POM121L8P-201ENST00000417732 1281 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 POM121L9P-203ENST00000441984 1285 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AC106886.1-201ENST00000568660 600 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AC017083.2-201ENST00000608069 979 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 RPSAP52-203ENST00000622976 1023 ntBASIC15.24■□□□□ 0.03
RTP4Q96DX8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RTP4Q96DX8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTP4Q96DX8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 BEND3P1-201ENST00000421591 1944 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC011840.2-201ENST00000563063 1520 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 CLUHP2-201ENST00000426660 1303 ntBASIC15.23■□□□□ 0.03
RTP4Q96DX8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RTP4Q96DX8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RTP4Q96DX8 AC079776.1-201ENST00000401540 1152 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms