Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 HLA-V-201ENST00000429037 534 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 RPS2P32-201ENST00000439199 892 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.24□□□□□ -0.61
RNF183Q96D59 KRT223P-202ENST00000449164 1292 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 KLF2P4-201ENST00000451959 1225 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC022137.2-201ENST00000503482 481 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 KRT18P25-201ENST00000508931 1278 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.24□□□□□ -0.61
RNF183Q96D59 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC025181.2-201ENST00000606994 802 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 AP005019.2-201ENST00000615104 511 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RNF183Q96D59 MIR6775-201ENST00000617557 69 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.23□□□□□ -0.61
RNF183Q96D59 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
RNF183Q96D59 CTBP2P5-201ENST00000454986 1264 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC11.23□□□□□ -0.61
RNF183Q96D59 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.23□□□□□ -0.61
RNF183Q96D59 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 BX539320.1-201ENST00000623759 877 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC011700.1-201ENST00000610409 2627 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC041040.2-201ENST00000622926 2899 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 PDIA3P1-201ENST00000471856 1510 ntBASIC11.23□□□□□ -0.61
RNF183Q96D59 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms