Protein–RNA interactions for Protein: Q8WUH2

TGFBRAP1, Transforming growth factor-beta receptor-associated protein 1, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1Q8WUH2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TGFBRAP1Q8WUH2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 FAM58BP-201ENST00000439056 645 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 PUDPP3-201ENST00000445368 636 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 RHOQP1-201ENST00000555758 579 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 MIR3619-201ENST00000579667 83 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AC005962.1-201ENST00000584100 773 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AC027601.3-201ENST00000622907 509 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 Z98259.2-201ENST00000641583 609 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AGAP7P-201ENST00000582299 2062 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 AGAP14-201ENST00000624701 2060 ntBASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TGFBRAP1Q8WUH2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ACTG1P2-201ENST00000415776 1125 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ACTG1P11-201ENST00000425411 1125 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AC011742.3-201ENST00000439053 820 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AC012441.2-201ENST00000444843 739 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 RN7SL11P-201ENST00000471305 293 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 MARK2P5-201ENST00000507649 634 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 CHMP4BP1-201ENST00000556017 588 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AL160314.3-201ENST00000556041 767 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SNORD3B-2-202ENST00000571722 791 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AC008805.1-201ENST00000590892 364 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 MIR6720-201ENST00000611664 98 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 AP001505.2-201ENST00000616815 443 ntBASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.66■□□□□ 0.42
TGFBRAP1Q8WUH2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms