Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AL161645.1-201ENST00000622716 1255 ntBASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 CICP16-201ENST00000502609 2813 ntBASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AL365181.3-201ENST00000605886 3222 ntBASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 AC020910.6-201ENST00000623084 1459 ntBASIC9.79□□□□□ -0.84
SMIM11BQ8TCY0 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 FOXO1B-201ENST00000504678 1527 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AL138918.1-201ENST00000568306 659 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 CLEC4GP1-201ENST00000596555 870 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 DBP-204ENST00000599385 709 ntTSL 3 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AL645728.2-202ENST00000641679 227 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 REXO1L1P-201ENST00000379010 6598 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 AP002414.3-201ENST00000589352 1468 ntBASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SMIM11BQ8TCY0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms