Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC055811.4-201ENST00000624039 1754 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC138035.3-201ENST00000622706 2791 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
FNDC9Q8TBE3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AP000845.1-201ENST00000581677 2131 ntBASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AL137783.1-201ENST00000623494 1896 ntBASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AC006001.1-201ENST00000325130 474 ntBASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
FNDC9Q8TBE3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms