Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SHKBP1Q8TBC3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 CICP23-201ENST00000605013 2741 ntBASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 EIF4HP1-201ENST00000453115 687 ntBASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 AP000593.2-201ENST00000542775 1433 ntBASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SHKBP1Q8TBC3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AL137783.1-201ENST00000623494 1896 ntBASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC106872.11-201ENST00000605838 421 ntBASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC138649.2-201ENST00000615886 705 ntBASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SHKBP1Q8TBC3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AL662890.1-201ENST00000396818 632 ntBASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms