Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 OR7E115P-201ENST00000382617 1024 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC098657.1-201ENST00000416270 1135 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AC092573.1-201ENST00000433054 884 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 STK24P1-201ENST00000455035 1291 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 CMC2-204ENST00000562713 573 ntTSL 3 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 CMC2-209ENST00000565108 399 ntTSL 2 BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 AL662844.4-201ENST00000606367 2838 ntBASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL22A1Q8NFW1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 IGKV1OR-2-201ENST00000457995 350 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 RN7SL846P-201ENST00000467429 292 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 EEF1GP8-201ENST00000506566 1154 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 SRP14-208ENST00000560773 468 ntTSL 3 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AC079414.2-201ENST00000567157 1104 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 PDXDC2P-206ENST00000534700 1315 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 AC010491.1-201ENST00000563101 2797 ntBASIC19.24■□□□□ 0.67
COL22A1Q8NFW1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 AC023024.2-201ENST00000623561 1993 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 SIRPB3P-201ENST00000340424 1216 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 FAM21EP-201ENST00000417804 985 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 AP000244.1-201ENST00000424582 201 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 MIR4746-201ENST00000579802 71 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 AC006116.2-201ENST00000589958 988 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 AL009176.1-201ENST00000607876 650 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 URAHP-205ENST00000610227 398 ntBASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL22A1Q8NFW1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC19.22■□□□□ 0.67
COL22A1Q8NFW1 RN7SL375P-201ENST00000492442 298 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms