Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC018665.1-201ENST00000622927 1362 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC232323.1-201ENST00000540724 2099 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC106881.1-201ENST00000605849 3329 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 ACTBP8-201ENST00000403258 1108 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AC009486.1-201ENST00000569860 813 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CLUHP6-201ENST00000580789 941 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 AL731571.1-201ENST00000617058 5428 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 LRRC59-203ENST00000576448 1531 ntBASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TTC9CQ8N5M4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 AC023090.2-201ENST00000625182 2110 ntBASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 AC092364.2-202ENST00000597012 1073 ntBASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TTC9CQ8N5M4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms