Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC063926.3-201ENST00000624734 5658 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 ISCA2P1-201ENST00000425548 448 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 PDIA3P2-201ENST00000428073 158 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 HLA-J-204ENST00000495278 958 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 POU5F1P2-201ENST00000521750 823 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC242376.1-201ENST00000559033 726 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC103988.2-201ENST00000561804 725 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC018635.2-201ENST00000608625 364 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AC103691.2-201ENST00000618824 433 ntBASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SYNPOQ8N3V7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AC023157.3-201ENST00000619086 2088 ntBASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 RCC2P8-201ENST00000502779 1035 ntBASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AC132192.2-201ENST00000596206 1147 ntBASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AC012044.1-201ENST00000603431 297 ntBASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AP003680.1-201ENST00000598970 3660 ntBASIC15.18■□□□□ 0.02
SYNPOQ8N3V7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SYNPOQ8N3V7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms