Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC116Q8IYX3 AC140479.7-201ENST00000636301 2332 ntBASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 AP006294.1-201ENST00000415407 339 ntBASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 KRT18P25-201ENST00000508931 1278 ntBASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC116Q8IYX3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCDC116Q8IYX3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AL009178.2-201ENST00000597278 2719 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 GIMAP3P-201ENST00000495150 836 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC026434.2-201ENST00000506094 1078 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC009486.1-201ENST00000569860 813 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 RN7SL440P-201ENST00000577855 343 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 AC027307.3-201ENST00000594262 1100 ntBASIC14.2□□□□□ -0.14
CCDC116Q8IYX3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms