Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 HCG4P8-203ENST00000443049 980 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 FAM210CP-201ENST00000445714 574 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC023141.13-201ENST00000604991 943 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC148477.8-201ENST00000624298 468 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AC007064.4-201ENST00000637740 555 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LYSMD2Q8IV50 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AC092910.1-201ENST00000482027 1129 ntBASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 POM121L14P-201ENST00000406100 1558 ntBASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AL607033.1-201ENST00000623900 1599 ntBASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LYSMD2Q8IV50 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.19□□□□□ -0.3
LYSMD2Q8IV50 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms