Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 GNG10P1-201ENST00000452289 199 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 RN7SL23P-201ENST00000484055 275 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 RN7SL582P-201ENST00000491078 279 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 RNA5SP406-201ENST00000516106 112 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 AP002353.1-201ENST00000528257 1599 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 KRT8P28-201ENST00000433288 1390 ntBASIC18.41■□□□□ 0.54
COL23A1Q86Y22 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
COL23A1Q86Y22 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 KRT18P46-201ENST00000435568 1279 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 SERBP1P2-201ENST00000436888 1164 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 AC063952.3-201ENST00000467756 308 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 GOLGA2P7-209ENST00000560408 745 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MBP-238ENST00000580402 915 ntTSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 FTLP5-201ENST00000586853 534 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MIR6746-201ENST00000620971 63 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 ENPP7P8-202ENST00000527856 1345 ntBASIC18.4■□□□□ 0.54
COL23A1Q86Y22 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL23A1Q86Y22 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL23A1Q86Y22 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL23A1Q86Y22 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.39■□□□□ 0.54
COL23A1Q86Y22 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL23A1Q86Y22 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 OR8T1P-201ENST00000421347 918 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AC026470.1-201ENST00000478038 846 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 AC124068.2-201ENST00000569473 1109 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 CYP4F36P-201ENST00000589193 186 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.39■□□□□ 0.53
COL23A1Q86Y22 LINC00244-201ENST00000625073 613 ntBASIC18.39■□□□□ 0.53
COL23A1Q86Y22 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms