Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 AC020910.5-201ENST00000623668 1865 ntBASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LRRTM4Q86VH4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRTM4Q86VH4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 BRWD1P1-201ENST00000401091 371 ntBASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC079178.1-201ENST00000420915 656 ntBASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 AC002472.3-201ENST00000640124 621 ntBASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRTM4Q86VH4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AL023775.1-201ENST00000454907 1746 ntBASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AC006058.4-201ENST00000624016 1670 ntBASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.69□□□□□ -0.06
LRRTM4Q86VH4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms