Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 FO681548.1-201ENST00000455617 1132 ntBASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ECM1P1-201ENST00000604092 1279 ntBASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ENPP7P14-201ENST00000621765 1040 ntBASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 PDIA3P1-201ENST00000471856 1510 ntBASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LYSMD3Q7Z3D4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 FAM197Y7-201ENST00000432892 766 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 AC245100.3-201ENST00000441281 285 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 KRT90P-201ENST00000549264 1064 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 RN7SL48P-201ENST00000579283 293 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 MIR6805-201ENST00000615055 62 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 AC005840.4-201ENST00000541242 2494 ntBASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD3Q7Z3D4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AC013726.1-201ENST00000563747 2285 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 POM121L8P-201ENST00000417732 1281 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 POM121L9P-203ENST00000441984 1285 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms