Protein–RNA interactions for Protein: Q6VB84

FOXD4L3, Forkhead box protein D4-like 3, humanhuman

Predicted RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3Q6VB84 TUBB3P1-201ENST00000405796 1332 ntBASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 AC152010.1-201ENST00000415779 2006 ntBASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXD4L3Q6VB84 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AC254562.1-201ENST00000417586 456 ntBASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AC125807.1-201ENST00000483097 614 ntBASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 AL137783.1-201ENST00000623494 1896 ntBASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
FOXD4L3Q6VB84 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AC073592.8-201ENST00000624126 511 ntBASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 AL360270.3-201ENST00000609118 1348 ntBASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXD4L3Q6VB84 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms