Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 SETP8-201ENST00000435341 628 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC133552.4-201ENST00000576103 676 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC243960.2-201ENST00000600996 747 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC005066.1-201ENST00000613582 1007 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AC087821.1-201ENST00000623639 567 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AL139099.5-201ENST00000635274 300 ntBASIC12.48□□□□□ -0.41
TREML4Q6UXN2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TREML4Q6UXN2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CLK3P2-201ENST00000427566 1453 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC096656.1-201ENST00000623826 1364 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC093525.8-201ENST00000624099 1342 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 USP32P1-208ENST00000506594 1164 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AL450472.2-201ENST00000603663 1156 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 BNIP3P35-201ENST00000604530 490 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 MIR6069-201ENST00000620069 79 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AL445984.1-201ENST00000637834 659 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC097376.2-205ENST00000610159 5334 ntBASIC12.47□□□□□ -0.41
TREML4Q6UXN2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TREML4Q6UXN2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms