Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 REXO1L2P-201ENST00000425429 2069 ntBASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 AL137783.1-201ENST00000623494 1896 ntBASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFWD3Q6PCD5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 FO681548.1-201ENST00000455617 1132 ntBASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 RNA5SP486-201ENST00000515961 83 ntBASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFWD3Q6PCD5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.66■□□□□ 0.1
RFWD3Q6PCD5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms