Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 ACTG1P3-201ENST00000431775 1114 ntBASIC17.94■□□□□ 0.46
RNF20Q5VTR2 AC007969.1-201ENST00000433675 447 ntBASIC17.94■□□□□ 0.46
RNF20Q5VTR2 HMGN1P19-201ENST00000436976 333 ntBASIC17.94■□□□□ 0.46
RNF20Q5VTR2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 PTP4A1P2-201ENST00000546033 454 ntBASIC17.94■□□□□ 0.46
RNF20Q5VTR2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF20Q5VTR2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 GRK6P1-201ENST00000400595 1711 ntBASIC17.93■□□□□ 0.46
RNF20Q5VTR2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 AC098614.1-201ENST00000368528 745 ntBASIC17.93■□□□□ 0.46
RNF20Q5VTR2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 BAATP1-201ENST00000412284 1225 ntBASIC17.93■□□□□ 0.46
RNF20Q5VTR2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF20Q5VTR2 SBF1P1-201ENST00000444527 5631 ntBASIC17.92■□□□□ 0.46
RNF20Q5VTR2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AC012441.1-201ENST00000446669 685 ntBASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AC005089.1-201ENST00000619486 2241 ntBASIC17.92■□□□□ 0.46
RNF20Q5VTR2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF20Q5VTR2 AC134312.5-201ENST00000568031 1313 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms