Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 PUDPP3-201ENST00000445368 636 ntBASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC005077.2-201ENST00000449786 690 ntBASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC009955.4-201ENST00000597192 544 ntBASIC17.96■□□□□ 0.47
RFX7Q2KHR2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 AC020910.5-201ENST00000623668 1865 ntBASIC17.96■□□□□ 0.47
RFX7Q2KHR2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RFX7Q2KHR2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFX7Q2KHR2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
RFX7Q2KHR2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 SLC25A24P2-201ENST00000415059 510 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 FNTAP2-201ENST00000430308 634 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 MIR3619-201ENST00000579667 83 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AL645939.5-201ENST00000606834 243 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AC138649.2-201ENST00000615886 705 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AC002472.3-201ENST00000640124 621 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 AGGF1P1-201ENST00000509500 2073 ntBASIC17.95■□□□□ 0.46
RFX7Q2KHR2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RFX7Q2KHR2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC022217.1-201ENST00000521069 738 ntBASIC17.94■□□□□ 0.46
RFX7Q2KHR2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC103988.2-201ENST00000561804 725 ntBASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC106872.11-201ENST00000605838 421 ntBASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 AC138627.1-207ENST00000641560 1006 ntBASIC17.94■□□□□ 0.46
RFX7Q2KHR2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFX7Q2KHR2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 AC010141.1-201ENST00000411585 623 ntBASIC17.93■□□□□ 0.46
RFX7Q2KHR2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 NDUFV2P1-201ENST00000596415 907 ntBASIC17.93■□□□□ 0.46
RFX7Q2KHR2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.93■□□□□ 0.46
RFX7Q2KHR2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms